Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNLKSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE
1RZR Chain:T ((2-88))
-AQKTFTVTADSGIHARPATTLVQAASKFDSDINLEFNGKTVNLKSIMGVMSLGIQKGATITISAEGSDEADALAALEDTMSKEGLGE
General information:
TITO was launched using:
RESULT:
Template:
1RZR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61740 for 658 contacts (-93.8/contact) +
2D Compatibility (PS) -9534 + (NN) -5860 + (LL) 208
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -86876.0 ( -132.03 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_1RZR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RZR-query.scw
PDB file :
Tito_Scwrl_1RZR.pdb
: