Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSILVTGANGQLGTELVQLLKEHN-------LTVTEWDKDSVDIVDKAAVKKAMLDLKPEWIIHCAAFTNVEAAEDELKNVNWEVNVDGTENISEAAEIVGAKLVYISTDYVFDGTKKEAYLPDDKTNPLNQYGIAKLAGEKVALEKNSQTYVIRTSWVFG---KYGNNFVYSML-KLAETHKELKVVNDQLGRPTYTYDLADFIRFVIEK---NPAY-GIYQFSNSGTATWFEFATEILKDKDVT---VNPCTSDEFPQKAERPKTSIMSLEKVEKLGFNIPTWQDALVRFKK |
2YDX Chain:A ((5-278)) | --VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQ-PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNP-PYREEDIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPIT-DSPVLGAQRPRNAQLDCSKLETLG--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102971 for 2077 contacts (-49.6/contact) +
2D Compatibility (PS) -27580 + (NN) -6061 + (LL) 1672
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -152540.0 ( -73.44 by residue)
QMean score : 0.513
|
|
|