Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYPIKYIENNLVFNNDGECFAYYELIPYNYSFLSPDEKYQVHDNFRQLVAQSRDGKIHALQLATESSIRATQERSKLEVKGRLKEVAHRKIDEQTEALVSMIGDNQVDYRFFIGFKLLLNEQELSIQSVSQEIKKAVQEFLNGVNHKLMGDFVSMSNAEIDRFSKMENLLESKISRRFKIRKLDKNDFGYIIEHIYGQTGTPYEEYEYHLPKKYQDKEVLVKKYDILKPTRCLIDESQRYLKIIHEDETTYVAYFTINSIVGELDFPSSEIFYYQQQQ---FTFPIDTSMNVEIVANKKALTTVRNKKKELKD-------LDSHAWESDNETSNNVIDALDSVNELETTLDQ-SKESMYKLSYVVRVSAKDLDELKRRCDEVKDFYDDLSIKLVRPFGDMLGLHGEFIPASKRYINDYIQYVTSDFLAGLGFGATQTLGEHEGIYVGYNLDTGKNVYLKPALASQGVKGSVTNALASAFIGSLGGGKSFSNNMLVYYAVLFGGQAVIVDPKAERGKWKETLPEIAHEINIVNLTSDDENKGLLDPYVILSRKKDSESLAIDILTFLTGISSRDSDKFPVLRKAIRNVTQSEQRGLLLVIDELRKEDTSISNSIADHIESFVDYDFAHLLFSDGNVTQSISLEKQLNIIQVADLVLPDADTSFEEYTTMELLSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVYFVTQNADDLLDEKMKNNIGLKFAFRSTDLVEIKKTLTFFGVDPEDENNQKRLRELENGQCLISDLYGRVGVMQFHPIFEELLQAFDTRPPIRNEVE |
3JWD Chain:L ((73-193)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTINSLQPE-DFAT----YYCQQANSFFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12268 for 559 contacts (21.9/contact) +
2D Compatibility (PS) -11432 + (NN) 2534 + (LL) 49860
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: 47930.0 ( 85.74 by residue)
QMean score : 0.123
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