Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 3ML1 Chain:A ((718-743)) | -------------------------------------------------------------------------------------------------------------------------------------------AVVFMHPEDAKALGLRRGVEVEVVSR---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ML1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8757 for 105 contacts (-83.4/contact) +
2D Compatibility (PS) -2771 + (NN) 620 + (LL) 13624
1D Compatibility (HY) -2000 + (ID) 300
Total energy: 416.0 ( 3.96 by residue)
QMean score : 0.634
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