Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQA-ELEQIQQQLFDAGGDLAT--EEGKRAYKLTSE-PVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
2R6X Chain:A ((8-187))
-KIYTKNGDKGQTRIIGKQILYKNDPRVAAYGEVNELNSWVGYTKSLINSHTQVLSNELEEIQQLLFDCGHDLATPADDERH-FKFKQEQPTVWLEEKIDNYTQVVP---KFILPGGTQLASALHVARTITRRAERQIVQLMREEQINQDVLIFINRLSDYFFAAARYANYLEQQPDMLYR-----------
General information:
TITO was launched using:
RESULT:
Template:
2R6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58110 for 1327 contacts (-43.8/contact) +
2D Compatibility (PS) -18636 + (NN) -9876 + (LL) 1472
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -105350.0 ( -79.39 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2R6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R6X-query.scw
PDB file :
Tito_Scwrl_2R6X.pdb
: