Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQAGYKIIPVNPNADEILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQLGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD
3Q9U Chain:A ((9-85))
----TDEGIRETLTRYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPNYEEVLGRKCYPSVLDIPDKIEVVDLF---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q9U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30647 for 468 contacts (-65.5/contact) +
2D Compatibility (PS) -8323 + (NN) -4917 + (LL) 4948
1D Compatibility (HY) -7200 + (ID) 1450
Total energy: -47589.0 ( -101.69 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_3Q9U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q9U-query.scw
PDB file :
Tito_Scwrl_3Q9U.pdb
: