Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQLFSAFDRETIERNLQEEKFDLVIVGGGITGAGIALDATSRGMSVALVEMGDF-ASGTSSRSTKLVHGGLRYLQQFEIKEVADLGKERAIVYENGPHVTTPEWMMLPFHKGG----NMGKTTASFGIRLYDYLAGVKKN--------ERRKILSAKETLAKNPFVKKD---GLKGSGYY-VEYRTDDARLTIEVMKKAVELGANAINYTKAEHFLYDDNKQVVGVTV--TDRLSGKAYDIKGHRVINAAGPWVDKVRKLDYATNNKHLRLTKGIHLVIDKQKFPMEQAVYFDTPD--GRMVFAIPR-DKKVYVGTT--DTVYDEAVINPKALESDHNYVIKAIN-YMFPDVHITEKDIESSWAGVRPLIYEEGKDPSEISRKDEVWFSESGLITMAGGKLTGYRKMAEKLLDDVSKTLAKETGKKYKTVQTKHLPISGGDIGGSEQLEAFLSKKAKEGNNRFGWTLEEGREMAKRFGSNIDQLFTYAQEHKEQNETTLPNSLYAELRYSIQHEAVTTPIDFLLRRTGYLLFDMPYLLEWKDAVVDEMAKQFHWSDDVKQTYIEELNIQINDAREPADWHDR |
| 4X9M Chain:A ((36-356)) | -------------------ETRDVLIVGGGVIGCATAYELSQYKLKVTLVEKHHYLAQETSHANSGVIHTGIDPNPHKLTAKYNILGKKL--------------WLNTYFKRLGFPRQKIRTLIVAFNEMEREQLEVLKQRGIANQINLEDIQMLSKEETLKLEPYVNPEIVAGLKIEGSWAIDPVLASKCLALAAQQNKVQICTNT--------EVTNISKQVDGTYLVWTNNETTPSFKVK--KIIDAAGHYADYLAHLAKADDFEQ-TTRRGQYVVVTNQGELHLNSMVFMVPTIHGKGVIVSPMLDGNFLVGPTALDGVDKEAT---RYITKDAPCMLTKIGKHMVPSLNINNALI--SFAGSRPI--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56282 for 2296 contacts (-24.5/contact) +
2D Compatibility (PS) -30945 + (NN) -1051 + (LL) 17228
1D Compatibility (HY) -14000 + (ID) 4100
Total energy: -89150.0 ( -38.83 by residue)
QMean score : 0.337
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