Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKKNLRMLALGFLISAVVLLVYNQFFSTQTKADETKATSTKAGSDENSSTWKNKYEKLLAQQEVDKATEAEAKKKAEEDAKKKAEEAKKVKSYTLKISKGDPSSKAG----DELQANGIIKSASDFDKYLRDNDYEKYIRDGSYNLKSDMSYETIAKILTHKN |
2WEA Chain:A ((43-95)) | ------------------------------------------------------------------STELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSSASGNVFTDSVTVGGV-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16628 for 188 contacts (88.4/contact) +
2D Compatibility (PS) -4584 + (NN) 3929 + (LL) 7568
1D Compatibility (HY) -2400 + (ID) 750
Total energy: 20391.0 ( 108.46 by residue)
QMean score : 0.489
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