Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKD-SVLLQTKK------SGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATK-------------------PLTTTFYWNDESPEKIMFVTYSPEW-----------------------------NFQIENWDYTLDQLDK------------IDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRD-------SATKNLIVAN-----I-----MQFAVHDNV-LLTIEKN--SDEKLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNK--KESTILE----L-MDNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF |
| 1Z68 Chain:A ((63-429)) | ------------------------------------------------SNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ-----NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRV-QNVSVLSICDFREDWQTWDCPKT-QEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIK-DTVENAI--QITS----GKWEAINI-FRVTQDSLFYSSNEF----EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCY----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70364 for 1889 contacts (-37.2/contact) +
2D Compatibility (PS) -29497 + (NN) -4586 + (LL) 6232
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -104565.0 ( -55.35 by residue)
QMean score : 0.292
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