Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VATKKKTFEEAIAELETIVEALENG-SASLEDSLDMYQKGIELTKLCQDKLQSAEKRMAKVVTDAGEEIPFEADGE
1X9B Chain:A ((16-47))
--PSKSVFVRNLNELEALAVRLGKSYRIQLDQAK------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X9B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3683 for 150 contacts (-24.6/contact) +
2D Compatibility (PS) -3407 + (NN) -1723 + (LL) 3448
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -7315.0 ( -48.77 by residue)
QMean score : 0.888
(partial model without unconserved sides chains):
PDB file :
Tito_1X9B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X9B-query.scw
PDB file :
Tito_Scwrl_1X9B.pdb
: