Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKGHRHIIIRELITSNEIDTQEDLVELLLERDVKVTQATVSRDIKELHLVKVPTQTGGYK-YSLPADNS-FNPHQKLKRALIDCFIGIDNVQFMIILKVMPGNGNSVGALIDNLDWPEKAGTICGDDTCLIICRSEENAKTLTDRFIDML
3LAJ Chain:A ((17-166))
-NRAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVVPE---VSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMF----
General information:
TITO was launched using:
RESULT:
Template:
3LAJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81640 for 989 contacts (-82.5/contact) +
2D Compatibility (PS) -15570 + (NN) -9033 + (LL) 536
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -114307.0 ( -115.58 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_3LAJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LAJ-query.scw
PDB file :
Tito_Scwrl_3LAJ.pdb
: