Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LELPFSGQSIIPAAHNQKDMEKILELGLTYMVMLET-----------------------HVAQLKSLVKYAQA--GGKKVLLHADLVNGLKN--DDYAIDFLCTEICPDGIISTRGN------AIMKAKQHKMLAIQRLFMIDSSACNKGVALIQKVQPDCIEL--LP---GIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW |
| 3VND Chain:A ((37-237)) | ------------------IIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLL-LYANLVFANGIDEFYTKAQA-AGVDSVLIADVPVEESAPFSKAAKAHGIAPI---FIAPPNADADTLKMVSEQGEGYTYLLSRAGVT-PIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95363 for 1157 contacts (-82.4/contact) +
2D Compatibility (PS) -16861 + (NN) -10309 + (LL) 1892
1D Compatibility (HY) 0 + (ID) 1150
Total energy: -121791.0 ( -105.26 by residue)
QMean score : 0.412
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