Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLELPFSGQSIIPAAHNQKDMEKILELGLTYMVMLET-----------------------HVAQLKSLVKYAQA--GGKKVLLHADLVNGLKN--DDYAIDFLCTEICPDGIISTRGN------AIMKAKQHKMLAIQRLFMIDSSACNKGVALIQKVQPDCIEL--LP---GIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW
3VND Chain:A ((37-237))------------------IIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLL-LYANLVFANGIDEFYTKAQA-AGVDSVLIADVPVEESAPFSKAAKAHGIAPI---FIAPPNADADTLKMVSEQGEGYTYLLSRAGVT-PIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSA---


General information:
TITO was launched using:
RESULT:

Template: 3VND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95363 for 1157 contacts (-82.4/contact) +
2D Compatibility (PS) -16861 + (NN) -10309 + (LL) 1892
1D Compatibility (HY) 0 + (ID) 1150
Total energy: -121791.0 ( -105.26 by residue)
QMean score : 0.412

(partial model without unconserved sides chains):
PDB file : Tito_3VND.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VND-query.scw
PDB file : Tito_Scwrl_3VND.pdb: