Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILV-------DDEATAK--EIQTKLKNGEK-FTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN |
1M5Y Chain:A ((284-389)) | ----------------------------------------------------------------------------------------------------------------------------------------EVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRL-NKGQMSAPVHSSFGWHLIELL--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31310 for 639 contacts (-49.0/contact) +
2D Compatibility (PS) -10077 + (NN) -9758 + (LL) 14972
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -43473.0 ( -68.03 by residue)
QMean score : 0.634
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