Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILV-------DDEATAK--EIQTKLKNGEK-FTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN
1M5Y Chain:A ((284-389))----------------------------------------------------------------------------------------------------------------------------------------EVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRL-NKGQMSAPVHSSFGWHLIELL---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1M5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31310 for 639 contacts (-49.0/contact) +
2D Compatibility (PS) -10077 + (NN) -9758 + (LL) 14972
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -43473.0 ( -68.03 by residue)
QMean score : 0.634

(partial model without unconserved sides chains):
PDB file : Tito_1M5Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M5Y-query.scw
PDB file : Tito_Scwrl_1M5Y.pdb: