Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHKVGILGGTFDPPHLAHLHMAEEAKKQLELEKILFLPNKIPPHKHISGMASINERVEMLQLMIEGIDSFEIDTRELMRTGKSYTYDTMRDMIIEQPDTDFYFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPLYQPEVPYDVVKIDMPKTTISSTEIR---NDIEHAEAFLPEKVWSYIKEHQLYGKK
3E27 Chain:A ((3-187))
---KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY---
General information:
TITO was launched using:
RESULT:
Template:
3E27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126286 for 1423 contacts (-88.7/contact) +
2D Compatibility (PS) -19677 + (NN) -10641 + (LL) 272
1D Compatibility (HY) -18400 + (ID) 4500
Total energy: -179232.0 ( -125.95 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_3E27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E27-query.scw
PDB file :
Tito_Scwrl_3E27.pdb
: