Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTATQKRFLRKEAHNIQPIFQVGKGSVSPNLIIHVKEALEARELIKISILQNCEEDKQTVAEKISARSGAEIVQ---VIGRTIILYKTSVNKQQIKLP |
3LYV Chain:A ((3-50)) | --------------------------------------------VVRTKNVTLKPMDVEEARLQMELLGHDFFIYTDSEDGATNILYRREDG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3578 for 184 contacts (19.4/contact) +
2D Compatibility (PS) -4436 + (NN) 779 + (LL) 4512
1D Compatibility (HY) 800 + (ID) 0
Total energy: 5233.0 ( 28.44 by residue)
QMean score : 0.069
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