Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTEEVRCIGCGAVIQTEDPDKIGYAPKSSLNNEQVICKRCFRLKHYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLVGNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPPTEEDMKTLPKLVPYSFTVKEKADIVFSGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV |
| 2YV5 Chain:A ((141-226)) | -----------------------------------------------------------------------------------------------------------------------------------AGYDVLKVSAKTGEGIDELVDYLE----GFICILAGPSGVGKSSILSRLTGEELRTQEV--------TTTGVRLIPFGKGSFVGDTPGF-------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24829 for 447 contacts (-55.5/contact) +
2D Compatibility (PS) -8421 + (NN) -1762 + (LL) 19832
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -21730.0 ( -48.61 by residue)
QMean score : 0.610
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