Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESDPAQQENKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQTGDHVNSYSSTSVDWQEKRKAFSVATDIPVSNTSLWFVEQGADPATQAIGTLSTKENPDK-----AYRVYITW----VDGEGWQPTKVEELKTNDKR |
| 3TN6 Chain:A ((227-282)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------YLLEHGADPKKIVIGHMCGNTDPDYHRKTLAYGVYIAFDHFGIQGM---PTDEERVRT---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2976 for 207 contacts (14.4/contact) +
2D Compatibility (PS) -4438 + (NN) 1187 + (LL) 8996
1D Compatibility (HY) 2000 + (ID) 50
Total energy: 10671.0 ( 51.55 by residue)
QMean score : -0.035
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