Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPI-VLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
4CHU Chain:A ((3-133))
-RLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVD---------KSLTHALWRDLSDRLTGFLNNITLGELVNN--------------
General information:
TITO was launched using:
RESULT:
Template:
4CHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62091 for 796 contacts (-78.0/contact) +
2D Compatibility (PS) -12505 + (NN) -4886 + (LL) 1916
1D Compatibility (HY) -12800 + (ID) 1950
Total energy: -92316.0 ( -115.97 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_4CHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CHU-query.scw
PDB file :
Tito_Scwrl_4CHU.pdb
: