Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQV---NSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKL-HAENFDAIILAKAGLARMGWLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVGANPSEIGNKVAEDLLSEGADTIIKELRNV |
| 3EQ1 Chain:A ((19-293)) | --RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIA---------------------FTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIQGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILH---PEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQLYLTGGVWSLDGS-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104977 for 1914 contacts (-54.8/contact) +
2D Compatibility (PS) -27012 + (NN) -17325 + (LL) 3924
1D Compatibility (HY) -19200 + (ID) 5800
Total energy: -170390.0 ( -89.02 by residue)
QMean score : 0.582
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