Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTLTNKLAEKEHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVSAIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILN--KLAMSKVQIPLIIMSYINPIFHLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEEIAKQAEGFIYAVTVNGTTGVRSEFDAHIDSHLAYLKSISPVPVLAGFGVSSIEH-VEKFAHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIKN
2DZU Chain:A ((3-243))
------------KDGSLIPYLTAGDPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVNGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIG-EKGREATEFLKKKVE-----
General information:
TITO was launched using:
RESULT:
Template:
2DZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187960 for 1990 contacts (-94.5/contact) +
2D Compatibility (PS) -26329 + (NN) -19210 + (LL) 2024
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -249525.0 ( -125.39 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_2DZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZU-query.scw
PDB file :
Tito_Scwrl_2DZU.pdb
: