Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFS--NETVTIVPGEKHIFWTDIKSYMQEDEVLNIYV-RSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGNIGIAIKNFSNEPVSIEAGERVAQGVFQKYLVADTDIV---ANESRVGGVGSTGR
1EU5 Chain:A ((16-136))
-------------KEFP-----LPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDY------QGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDF--------------
General information:
TITO was launched using:
RESULT:
Template:
1EU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44754 for 725 contacts (-61.7/contact) +
2D Compatibility (PS) -12954 + (NN) -4784 + (LL) 1244
1D Compatibility (HY) -9200 + (ID) 1900
Total energy: -72348.0 ( -99.79 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1EU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EU5-query.scw
PDB file :
Tito_Scwrl_1EU5.pdb
: