Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVENKVIVLAGMIGAGKSSYT----------ELIANELGTKAFYESIKD---------NRILEMFYDDPKRWAFALQIYFLNTRFR----SIKAALTDQNN---VLDRSIYEDA-LFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGL-LEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
3QEN Chain:A ((38-245))
---TRIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQS---ELTMEQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFG--QSLELDGIIYLQATPETCLHRIYLRGRNEEQ-----GIPLEYLEKLHYKHESWLL----HRTLKTNFD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3QEN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85212 for 1244 contacts (-68.5/contact) +
2D Compatibility (PS) -18703 + (NN) -8550 + (LL) 2252
1D Compatibility (HY) -13600 + (ID) 3100
Total energy: -126913.0 ( -102.02 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3QEN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QEN-query.scw
PDB file :
Tito_Scwrl_3QEN.pdb
: