Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARYRKVDED--FFEELEEILIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEIYQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGERTGVDVIKQAEGSDP--AAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK
4AK9 Chain:A ((86-382))-----------------------SGFSKTRENLA-VVDELLT-YWNLDESESILDELEEVLLVSDFGPKTALKIVDTIRKDILAGRLKSGPQIKEALKKNIFKLLTERVTTTE-LQLGNSRPAVLMIVGVNGGGKTTTLGKLANRFKKEGVKVLMAAGDT--AAAGEQLEVWAQRTGSEIV-MA----PRPAAVLSQAVRRAVEEDFDVVLCDTSGRLHTNYNLMEELRGCKRAVSKALSSAPNEVLLVLDGTTGLNMLAQAREFNQVIGVTGFILTKLDGTARGGCVVSVVDELSIPVKFVGVGEGIDDLQPFDAQSFVDALF--------


General information:
TITO was launched using:
RESULT:

Template: 4AK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181616 for 2475 contacts (-73.4/contact) +
2D Compatibility (PS) -31152 + (NN) -18415 + (LL) 2252
1D Compatibility (HY) -30400 + (ID) 6750
Total energy: -266081.0 ( -107.51 by residue)
QMean score : 0.557

(partial model without unconserved sides chains):
PDB file : Tito_4AK9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AK9-query.scw
PDB file : Tito_Scwrl_4AK9.pdb: