Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKQVVVMDEAAIKRALTRVSYEIIERNKGTKNLALVGIKTRGIYLAERLHKRILEIEGIDVPVGDIDITLYRDDLSFKDDKTREPAVHGTNIPFDINGKKVVLVDDVLYTGRTVRAAMDALMDVGRPAQIHLAVLADRGHRELPIRADYVGKNIPTSGNERVEVRLTDVDHAEDAVIINKNE
1XZN Chain:A ((1-169))
MQK-AVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYR-------------------VPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVD------------
General information:
TITO was launched using:
RESULT:
Template:
1XZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106760 for 1152 contacts (-92.7/contact) +
2D Compatibility (PS) -16842 + (NN) -8319 + (LL) 1488
1D Compatibility (HY) -19600 + (ID) 5350
Total energy: -155383.0 ( -134.88 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1XZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZN-query.scw
PDB file :
Tito_Scwrl_1XZN.pdb
: