Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIMNSLLKQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETGFVLENLFIGMTED-LGKM------NAFARELGKAQFITSLGISRILFHIRLLEEFLLDYASEIKTKSANYRELYLFSIKLHQVFSSFTQNLIEGYTHANEQMIVQKENQIIKESTKLIWIAENVFLLPLIGKITDERAKQITETALFEVCEQPVNYLIIDLSGVQLESPNIGKYIEYFFSSLKLVGVTPIITGMQPQTAKVMVQANLTEQHGIKTFATLRQATKTLMKEKEARNAHK |
| 3PMD Chain:A ((10-152)) | -YLCLYLKESQEKFISNWKKRILVHEHD--------PYK--NEIIKNGTHLLHVFTMYMREEINLQDIEDISKKIAQERMDAKVNIADFIYNTNEGKKEILNTLFLLN---PTGQECKVVIEQINLFFDHLIYSTIYSYYKLKKEYIHSYYELKKKY---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69499 for 877 contacts (-79.2/contact) +
2D Compatibility (PS) -14800 + (NN) -9799 + (LL) 11624
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -87824.0 ( -100.14 by residue)
QMean score : 0.466
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