Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADKPQTRSQYRNKQSGGSKKKSQKRGKRVAANIFKTIFFVGLFLAFFGIAAGATVFYDYAKDAPKLTDSKLRDPLSSKLLDKDGKVFAEVGTERREYIEYKDIPETLKNAILTTEDARFYEHDGIDPIRLGGAVIANLTDGFGAEGASTLSQQIIKMSYLDYTNKTLARKAQEAWLALQLEEKYSKNDILEIYVNKVYMSDRVHGMQTASEHYFGKNVKDLTLAQTALLAGMPQSPNNYNPYEHPEAAKKRRDQVLTNMYTHDKITKEEMTEAQKTPITTGLRSKKDREDKIYKYDSYVTQVLSEIPKE--YDVYRDGLTIHTALDRDAQEYTEKMLNTNEIVNFTDDEMQAGIVLQDTKTGRVQAIGGGRKQ--KVTRGYNYATQVKRSVGSTMKPIADYGPAFEYLDW-STAHILEDEPYTYSG-GTPINNWDFGYKGPISVRQALYQSRNIPALKTLQAVGLDKSEEFVNKLGITYDEGQNVESNAIGANSSNPMQMAGAYA--------AFGNKGIYNKPHTVTKIVLSDGQTEIDTEPQSTVAMKESTAYMVSDVLKDVLSIGTGTSAAVPGVPAAGKTGTTNIPPEFTSKYYYPSG-AARDSWFAGYTTNYSIAVWTGYDDKKKYVSASEQKIAQRMFSKLMAHASAGKTTADFKMPSNVVSVPILKGSNPIARAAQGTSSDKVSYELFLSGTAPTKTASTPEDEKKKAEEAAKKKKAEEDKKKTDEEKKKEEEAKKKAEEEAKKKAEEEAKNLTAPAGLRASYNAGSKQINVSWSAVEGATYEVTVNGSTTTVSSTSVSVSGGNPGDTVSINVVAVKDGKRSPASSTTVKIPDS |
2C5W Chain:B ((8-372)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNYLKEVINQVEEETGYNLLTTGMDVYTNVDQEAQKHLWDIYNTDEYVAYPDDELQVASTIVDVSNGKVIAQLGARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYESTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYALQQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIH--YSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKVVFSDG-SEKEFSNVGTRAMKETTAYMMTDMMKTVLTYGTGRNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFAGYTRKYSMAVWTGYSNRLTPLVGNGLTVAAKVYRSMMTYLSEGSNPEDWNIP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67252 for 2996 contacts (-22.4/contact) +
2D Compatibility (PS) -37552 + (NN) -17547 + (LL) 28520
1D Compatibility (HY) -26000 + (ID) 7450
Total energy: -127281.0 ( -42.48 by residue)
QMean score : 0.412
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