Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKKKTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEEKEKAKKAAEEKAAAEKAAEEKKAAAEKAEADKKKQEEDAVKAANAKKEQEAAEEKAAADKAAAEKAAAE------KAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKIKQANGLGSDNVPVGTVLTIPQ |
| 2EFK Chain:A ((106-193)) | --------------------------------------------------------------------------------------------------SQEMKQERKMHFQE---GRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAERLDQDINATKADVEKAKQQAHLRSHMAEESKNEYAAQ-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 41799 for 374 contacts (111.8/contact) +
2D Compatibility (PS) -9662 + (NN) -12658 + (LL) 9508
1D Compatibility (HY) 400 + (ID) 550
Total energy: 28837.0 ( 77.10 by residue)
QMean score : 0.612
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