Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VGGLMKKNTLILGIESSCDETAASVV-KNGNEIISSVVASQIESHKRFGGVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGVAVTEGPGLVGALLIGVNAAKTLAFMHNLPLVGVHHIAGHIYANRFETEFK---FPLLSLVVSGGHTELVLMKADNEFEIIGETRDDAAGEAYDKVARTLGLAYPGGVQIDK-----LAKDGED-----TFHFPRAMMDEGS---FDFSFSGLKSSFINTLHNLR--QRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQY-----DVKQLLLAGGVAANQGLRERLIQEVKLELPETELI---IPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPGLLLEDI |
| 3WUH Chain:A ((7-363)) | ------KGYKVLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTLD--------KAHIHHQARIGPLTERALIESNAR-EGIDLICVTRGPGMPGSLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVPQFPFVSLLVSGGHTTFVLSRAIDDHEILCDTIDIAVGDSLDKCGRELGFK---GTMIAREMEKFINQDINDQDFALKLEMP--------RNMLSFSFSAFITALRTNLTKLGKT---PEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETEL---------FNFYYPPMDLCSDNSIMIGWAG-IEIWESLRLVSDLDICP------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -166644 for 2478 contacts (-67.2/contact) +
2D Compatibility (PS) -32067 + (NN) -9806 + (LL) 2512
1D Compatibility (HY) -21200 + (ID) 5550
Total energy: -232755.0 ( -93.93 by residue)
QMean score : 0.441
|
|
|