Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VSLEEALLFREATVTDLKSIMNVENAAFTVPWTEAAFRNEFIINQYAYYLLAIYKEQVVGY------------AGVWLVLDEGHITNIAIHPDYQGNHYGEALLREMIRVAK-ERGVVRMTLEVRVSNDVAQGLYKKLGFQDGAIRKNYYPDTKEDALVMWVDL
2X7B Chain:A ((54-164))
------------------------------------------------FFVAIVDNSVVGYIMPRIEWGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLKGYYADG-EDAYLM----
General information:
TITO was launched using:
RESULT:
Template:
2X7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54490 for 582 contacts (-93.6/contact) +
2D Compatibility (PS) -10424 + (NN) -3078 + (LL) 5304
1D Compatibility (HY) -10400 + (ID) 1750
Total energy: -74838.0 ( -128.59 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_2X7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X7B-query.scw
PDB file :
Tito_Scwrl_2X7B.pdb
: