Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDVLTLLRNHRSFRKYKKGVEIPEEKLDAIIRAAQAAPSWINGQHYSIIAIKDQERKNKMAELCG-NQPYIAECSVFLCFVADFHRVKVASDMHG------------------------KSFQIAGEEDLLMVAATDIGLCMQNALTAAESLDYGTICIGGL-RRNITATAGFLNLPEFVMPVVGLCIGVPDVEAPVKPRLPKEAVYFEETYQTDVMPLLEAYDQEIIPFSEREGFVSYTERLAKFYDRPYYPNLTEQIKERGFLGGK
3GBH Chain:A ((8-209))INDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVQSDEMKEKVKESFGFNSRQLTTSSAMLIIFGDLQNYEKAEQIYGDAVEQQLMTEDIKAQLLDWILPYYKNLSREGMKDIVNI---DSSLMAMQLMLTAKAHGYDTNPIGGFDKENIADIIGYDS--DRYVPVLAIAIGKKAQDAHDSVRLPIDDV--------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GBH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147418 for 1306 contacts (-112.9/contact) +
2D Compatibility (PS) -19033 + (NN) -9313 + (LL) 4536
1D Compatibility (HY) -10000 + (ID) 2550
Total energy: -183778.0 ( -140.72 by residue)
QMean score : 0.569

(partial model without unconserved sides chains):
PDB file : Tito_3GBH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GBH-query.scw
PDB file : Tito_Scwrl_3GBH.pdb: