Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSIEIKSPEEFQAHI-NGEELVYVDYWKDNCPNCKMLDLSFAEFKNSEIASKVKVLKVKLEEMGENFFFDRDVQQTPTLVLYKGGEEIHRLNGFIPPNKIEEAVSLNA
2FA4 Chain:A ((4-103))
----QLKSASEYDSALASGDKLVVVDFFATWCGPCKMIAPMIEKF--AEQYSDAAFYKLDVDEV-SDVAQKAEVSSMPTLIFYKGGKEVTRVVG-ANPAAIKQAIASN-
General information:
TITO was launched using:
RESULT:
Template:
2FA4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47770 for 728 contacts (-65.6/contact) +
2D Compatibility (PS) -10755 + (NN) -2894 + (LL) 524
1D Compatibility (HY) -9200 + (ID) 1600
Total energy: -71695.0 ( -98.48 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_2FA4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FA4-query.scw
PDB file :
Tito_Scwrl_2FA4.pdb
: