Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLVAHPTFSYESGLTNYEVEIFAVYETTT-DFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTCDTEKDYEKGRMVIQGKLVTK |
| 4Y4Q Chain:A ((64-239)) | ------------------------------------------------------------------LQELNPEVLGWINVYGTNIDYPLVQAKDNE----------FAATGAIFLDARNNPKFEDFNTIIYGHHVENGVMFGDVAKFADQEFFDQHRYGSIYYNGVEKGLEIFEMLEVDAYDFNIYDPGIQGEDRQQAYLDHLLSVAMHKRDISLSPSDRIILLSTCFL--DVTNGRHIVVAKI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46841 for 1243 contacts (-37.7/contact) +
2D Compatibility (PS) -17623 + (NN) -6483 + (LL) 5752
1D Compatibility (HY) -15200 + (ID) 3050
Total energy: -83445.0 ( -67.13 by residue)
QMean score : 0.445
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