Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSDIIVADFWKNNEEILTDFDKDSFCESWTENE-MWSIEFKVAQTPKNAHCYSFLDYESSVYF--RGQ---EFVVKQLSHDAVGKTLSKDIRAPHIYYTCQDGRQDDAITGSFTLEQCLTHIFKTDNRG-FSWE-IIDP-SNILEKVQQENFGNNNYLTLIDQLLDDYGVVVIPD-NRHLVFKPREIYGAKTENFIR-----YKYNTDEASFDIDTLSLKTKIKGYGKVDSNGNNYF--SPITYTSPEVEKWGIRWQEPVSDERYTVAGNMQRRLKLELQD--YPATTGSVILKND-----YECEKGDYVLFIYEPLGIDYDVQIVAYKKYPF-T-IKAPEITLSNNKKSIVSIMAQLAKVLKGAK |
| 3D37 Chain:A ((24-343)) | ------------------------RYDIDSDFLIPADSFDFVIGR---------PDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCSAPQLNVKGMTVLDAAKKLAAP--WPQIKAVVLKAENNPALGKIDIE-P-GETVWQALTHIANSVGLHPWLEPDGTLVVGGAD-YSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTFLAQSHG------HDLKWVYKDPTMTLHRPK---TVVVS--DNLAALQKQAKKQLADWRLEGFTLTITVGGHKTRDGVLWQPGLRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELRLKEDGIWTP-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69953 for 2009 contacts (-34.8/contact) +
2D Compatibility (PS) -29708 + (NN) 2780 + (LL) 3376
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: -98805.0 ( -49.18 by residue)
QMean score : 0.322
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