Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIKQAIIKLETILENGNAIESGSFVKYSVIKNILS----LLEK-DQELKIIEMKVELNGVEDSIENATLLEKRLIEAKSLVEDLASTINSLEIKVK
4EED Chain:A ((147-224))
-------------------------YLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVLERPEKETVQRTHQLKRNLVELAATIWPLREVLSSL-----
General information:
TITO was launched using:
RESULT:
Template:
4EED.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5861 for 279 contacts (-21.0/contact) +
2D Compatibility (PS) -6967 + (NN) -6528 + (LL) 2388
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -24218.0 ( -86.80 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_4EED.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EED-query.scw
PDB file :
Tito_Scwrl_4EED.pdb
: