Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELEICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSYHDDIVN
1A8U Chain:A ((70-154))
---------------------------------------GYDYDTFAADLNTVLETLDLQDAVLVGFSMGT----GEVAR----------------------YVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPKEFFDGIVAAVKA----------------
General information:
TITO was launched using:
RESULT:
Template:
1A8U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36589 for 499 contacts (-73.3/contact) +
2D Compatibility (PS) -8688 + (NN) -1212 + (LL) 6960
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -48329.0 ( -96.85 by residue)
QMean score : 0.263
(partial model without unconserved sides chains):
PDB file :
Tito_1A8U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A8U-query.scw
PDB file :
Tito_Scwrl_1A8U.pdb
: