Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKDLLYTEEHEWVKADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEKVLD
1ZKO Chain:A ((18-131))
--------YTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQE---
General information:
TITO was launched using:
RESULT:
Template:
1ZKO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34654 for 863 contacts (-40.2/contact) +
2D Compatibility (PS) -12318 + (NN) -4894 + (LL) 848
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -64718.0 ( -74.99 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_1ZKO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZKO-query.scw
PDB file :
Tito_Scwrl_1ZKO.pdb
: