Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANKRKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIGAVLTAIIFSRIKKISFWQLADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLHLPDFIINQMYIDGAYYQPTFLYESLWNVLGFVILLIIRRTKIRRGELFLGYVIWYSFGRFFIEGMRTDSLMWGDFRVSQALSLLLIVLSIGIIIYRRLKMNPPYYMEDKFGKVVKKK |
| 1PGG Chain:A ((274-337)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFLQLKF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PGG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34357 for 328 contacts (-104.7/contact) +
2D Compatibility (PS) -6510 + (NN) -1449 + (LL) 19004
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -28962.0 ( -88.30 by residue)
QMean score : 0.001
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