Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDQIISALIFPCLLVILFARITYNRYVGLLLMVILIAASAKLGYTSSMWLIIIDAFSMTIGFVLATYMLRRLKKSGSDF
1OED Chain:B ((219-362))--FYIVYTIIPCILISILAILVF--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1OED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12075 for 81 contacts (-149.1/contact) +
2D Compatibility (PS) -2200 + (NN) -1131 + (LL) 5456
1D Compatibility (HY) -4000 + (ID) 300
Total energy: -14250.0 ( -175.93 by residue)
QMean score : -0.021

(partial model without unconserved sides chains):
PDB file : Tito_1OED.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OED-query.scw
PDB file : Tito_Scwrl_1OED.pdb: