Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIGENDQY-QKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFTEKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT |
4LHS Chain:A ((238-305)) | --------------------------------------FVMTLRQKHPDTPIIVIQTLIRETGNFNQKARENVKRQNEAIAEQVEVLRKKNVKNLYFIKEDQFLGT---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10792 for 354 contacts (-30.5/contact) +
2D Compatibility (PS) -7236 + (NN) -1228 + (LL) 11612
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -12544.0 ( -35.44 by residue)
QMean score : 0.308
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