Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKDVGIDLGTANVLIHVKGRG---IVVNE------PAVVAINNK--------TGQVLAVGT----EARDMVGRTPGDITAIKPMKDGVIADFDIVQEMLRFFIQ---KLNLKTFFSRP----------------------RILICCPTNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIFEPSGN----MIIDIGGGTADVAVLSMGDIV-----TSQSVKVAGNKWDADILNYV----KRKYNLLIG--ERTAENIKVTIGTACQGAKE-----EKMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDRG----IIMTGGGSLLHGLDELMSEQLKVPVLITE-NPLDVVALGTGILLDSLTNKKRNRF |
| 3I33 Chain:A ((26-396)) | ----IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKH---WPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLR----TACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLF-------RGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105268 for 2261 contacts (-46.6/contact) +
2D Compatibility (PS) -32257 + (NN) -6722 + (LL) 2700
1D Compatibility (HY) -12000 + (ID) 4550
Total energy: -158097.0 ( -69.92 by residue)
QMean score : 0.284
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