Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVL--EIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDA----LKTTVQKDYHHPILENLG-DNRLILMTAHRRENL--GEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQAANPYGDGFAANRILAAIKSHFEETDRPEDFIV |
| 4NEQ Chain:A ((2-358)) | ----KLSIILGTRPEIIKLSPIIRALEKT--NIDWHIIHTN----NMDKIFFEELNLPNPKYNLNI--GSGTHGEQTGKMLIEIEKVLLKEKPDVVVVQGDTNTVLAGALVASKLKIDVAHVEAGLRSFDRNMP--EEINRVLTDHISSYLFAPTEIAKNNLLREGIEENKIFVVGNTIVDATLQNLKIAEKNENVRAFFNSVVIDDDYFLLTLHRAENVDNKERLKNIVEGIFEIIEIY-DKAIIFSIHPRTKKRLKEFNLFDKLKSNKKIKIIEPVGYLEFLMLEKNAELILTDSGGVQEEACILKVPCITLRDNTERPETVEVGANILVGDNKEKLIK-AVEIMLNKKRNWK-----NPFGNGKSGERIV------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137898 for 2829 contacts (-48.7/contact) +
2D Compatibility (PS) -37232 + (NN) -17817 + (LL) 3556
1D Compatibility (HY) -28400 + (ID) 6650
Total energy: -224441.0 ( -79.34 by residue)
QMean score : 0.444
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