Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFMQKWLGLILIPFLMIMFTGTEYYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYALGYDIPTGRFSLVTAGAFMFVVAAYIQYSKKLFKFLTMIGFKKIDAWSRNLLRKITTVTLNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK |
| 3UKW Chain:C ((7-22)) | --------------------------PRKRPLEWDEDEEPPR------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -902 for 39 contacts (-23.1/contact) +
2D Compatibility (PS) -1918 + (NN) -2748 + (LL) 18568
1D Compatibility (HY) 400 + (ID) 150
Total energy: 13250.0 ( 339.74 by residue)
QMean score : -0.463
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