Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIALADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKFLAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPHKENGQIIPVETH---GIQMISMD-FFVEQG----EPVIWRGPM-LGKMIKMFLEEVRWGKLDYLLIDLPPGTGDVALDIHTLIPKCNE-LIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLADGQVLKVFGQGGGEKVAADLETQLLIQLPIEQP---EPNGNGYVSALFNSSSTSGKAYKTLAEKIIPYLS |
| 1G3R Chain:A ((3-233)) | ----------------------------------------------------------------------------------------------------RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDLTMANLSLVLG-VDDPDVTLHDVLAGEANVEDAIYMTQFDNVYVLPGAVDWEHVLKADPRKLPEVIKSLKD-----KFDFILIDCPAG---LQLDAMSAMLSGEEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRY------GRSDRDIPPEAAEDV---MEVPLLAVIP-EDPAIREGTLEGIPAVKYKPESKGAKAFVKLAEEI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133313 for 1937 contacts (-68.8/contact) +
2D Compatibility (PS) -22767 + (NN) -1851 + (LL) 10980
1D Compatibility (HY) -14800 + (ID) 3600
Total energy: -165351.0 ( -85.36 by residue)
QMean score : 0.376
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