Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVMTDPIADFLTRIRNANMVKHDKLELPASKIKKEIAEILKREGFIRDVEYIEDDNAGTIRVFLKYGAT-------GERVITGLKRISKPGLRVYAKSTEVPKVLNGLGIAIVSTSQGVLTDKEARAKQVGGEVLAYVW
1HNZ Chain:H ((1-138))
-MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW
General information:
TITO was launched using:
RESULT:
Template:
1HNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75972 for 968 contacts (-78.5/contact) +
2D Compatibility (PS) -13942 + (NN) -2279 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -109235.0 ( -112.85 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_1HNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNZ-query.scw
PDB file :
Tito_Scwrl_1HNZ.pdb
: