Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA
4QGA Chain:A ((4-202))----FITFEGPEGSGKTTVINEVYHRLVK-DYDVIMTREPGGVPTGEEIRKIVLE-GND-MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN--------DQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYL-


General information:
TITO was launched using:
RESULT:

Template: 4QGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60210 for 1533 contacts (-39.3/contact) +
2D Compatibility (PS) -20981 + (NN) -9754 + (LL) 1700
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -111545.0 ( -72.76 by residue)
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_4QGA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QGA-query.scw
PDB file : Tito_Scwrl_4QGA.pdb: