Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGKYVVTWALGHLVTLADPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRTDITTIVIATDAGREGELVARWIIDYAKIKKPL---KRLWISSVTDKAIREGFEHLKPGKAYENLYHSAVARSEADWVVGINATRALTTKYNAQLSCGRVQTPTLAMIQHREEEIRNFKSREYYGIT----ALTEQESFTWNNGQTFDKALAEKLVKSLQGENAVITDVSMKEKKTFSPGLYDLTELQRDANNRYDFSAKETLNIMQTLYE-------RHKVLTYPRTDSRFISTDIVPTLKERLVACGVGENAKAARQISVKPIKANKSFVDNSKVSD-HHAIIPTE---QPVSLGD-LSDKERKIYDLVVKRFLAVLSDPYIYEETSVKAKIGQEEFTLKGKVVKSL--GWKSIYGESREPDQLTKMKKGDTIPVKRINLETGKTKPPARFDEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADIIEKLFNSFSLEKQGKDIQITSKGRQLLELVPE---DLKSPELTARWEQKLSKIAKGELDYRKFTAEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKGKRGTMLVCQDRECGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCVCGHREKLSAFQQRRDKQKNKNVSKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK |
| 2GAJ Chain:A ((7-586)) | ---KYIVVESPAKAKTIKSILG-----------NEYEVFASMGHIIDLPK-----SKFGVDLEKDFE--PE---FAVIKGKEKVVEKLKDLAKKGEL---LIASDMDREGEAIA-WHI--ARVTNTLGRKNRIVFSEITPRVIREAVKN--PREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDGLTAE--IDVKEKKFFD---AETLKEIQSIDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVS-DYAKEEARNLITEVFGEEYVG-----------------------AHEAIRPTNVFMTPEEAGKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNTGEFP-FEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERL-------------------GIGRPSTYASTIKLLLNRGYIKKIRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGK---KTDKIVLREFYESFSSVFDRND-RIVVDFPTNQKC-SCGKEMRLSFGKYGFYLKC---ECGKTRSV-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131457 for 4275 contacts (-30.8/contact) +
2D Compatibility (PS) -57525 + (NN) -8502 + (LL) 10552
1D Compatibility (HY) -34000 + (ID) 8600
Total energy: -229532.0 ( -53.69 by residue)
QMean score : 0.452
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