Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKTTKIVIASLVSLTMVSNPLLTFAATNDVIDNTTEITTDKETSSTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAF-EMQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLDLSQNTNLTYLA---CDSNKLTNLDVTPL---TKLTYLNCDTNKLTKLDVSQNPLLTYLN---CARNTLTEIDVSHNTQLTELD-CHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFD-CSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHN--------------TQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELD-VSHNTKLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPDLLDQF--GNPMN------------------IEPG---DGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLADDEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLSPSEILNGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDEDNKQLNSTTEISGTIGDNYTTEPKTIEGYTLTTTPGNATGTFTTGSQTVTYVYTKNIEAAEPITVNYVDANGKTLAPSETLNGNVGDTYKATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNTNTDQPLPTKKPTNTTPTKPSNLKTTEVKKASDTLPKTGDSAPWKSALLGVFLSSTALVIWKKKK |
| 1O6V Chain:A ((10-466)) | ---------------------------------------------------------QDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLT--DITPLKNLTKLVDILMNNNQIA--DITPLANLTNLTGLTLFNNQITDIDPLKN--LTNLNRLELSSNTIS--DISALSGLTSLQQLSFGNQVT--DLKPLANLTTLE-------RLDISSNKV-----SDISVLAKL-----TNLESLIATNNQIS--DITPLGILTNLDELSLNGNQLKDIGTLASLTNL----TDL---DLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN--ISDISPVSSLTKLQRLFFYNNKVSDVSSLANLT--NINWLSAGHNQISDLTPLAN--LTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPD--ITW-NLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134305 for 3489 contacts (-38.5/contact) +
2D Compatibility (PS) -41284 + (NN) 3085 + (LL) 21604
1D Compatibility (HY) -27600 + (ID) 7300
Total energy: -185800.0 ( -53.25 by residue)
QMean score : 0.265
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