Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VERVYNFSAGPAVLPVPVLEKVQRELLSYNGSGMSVMELSHRSELFQNILDDAESLIRELMEIPDNYKVLFLQGGASLQFDMVPMN-LANGKKAAYVNTGSWAKKAISEAKKIQGVEVEVIASSEDRNFSYIPEIP--TVSSDVAYLHVTTNNTIEGTAMFDVPD-SAVPVVADMSSNILSSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIG-QVEGLPSMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYDYIDQSD-FFSSPVEPSARSLTNVPFVTNSAEFDKAFVKEAEANGFENLKGHRSVGGMRASLYNAFPIEGVEALIAFMEKFANARKGGEVRV |
2BI2 Chain:A ((1-356)) | VKQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLG--ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQNFPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQF----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208354 for 3032 contacts (-68.7/contact) +
2D Compatibility (PS) -39071 + (NN) -25068 + (LL) 636
1D Compatibility (HY) -34400 + (ID) 8650
Total energy: -314907.0 ( -103.86 by residue)
QMean score : 0.571
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