Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSF--HELESQINPENEYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNNSK |
1JC4 Chain:A ((21-63)) | ---------------------------------------------------------DEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQ--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7813 for 192 contacts (40.7/contact) +
2D Compatibility (PS) -4385 + (NN) -197 + (LL) 5212
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 6593.0 ( 34.34 by residue)
QMean score : 0.179
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