Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKANQLIAAIFDVNNTFMQGCNVVFDLALLNLLFMITCLPLVTIGAAKISLYRTLWQKLEGDQTNLLILYIKHLKKEWFQGMLLGLVELSILVVIIFDLTILHYQIGFIVSFLKITCYAFLLLTVMTSIYLFPMAARYEMSLLDTVKKSFIMACLNLKWTGVLMFLLIMTWFIMVQSSLLFMLTVSAIFIFAYTAFAYFKIIILQKQFAYFSKQQGDYQ |
| 1XKM Chain:A ((6-18)) | ---------------------------------------------PPGFTALIKTLRKCKII-------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1438 for 45 contacts (-32.0/contact) +
2D Compatibility (PS) -1398 + (NN) -360 + (LL) 22564
1D Compatibility (HY) -400 + (ID) 150
Total energy: 18818.0 ( 418.18 by residue)
QMean score : -0.023
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